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Originally Posted by skfny
However, when I power off the device, sometimes when I power back on, the apps running off the card are no longer open.
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Storage cards aren't connected all the time - when you go into standby, the card controllers will go into deep sleep mode, effectively unmounting the cards. It takes about 1/2 second to reinitialise when coming out of standby - so if there are any calls by a running program to the card, it may crash (NetFront for instance keeps its cache in its installed location). Most other apps should be ok.